Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EHT87_10250 | Not Available | Positive | 2514993 - 2515511 | 20125.1 |
| heat repeat domain-containing protein | EHT87_10255 | Not Available | Positive | 2515543 - 2516358 | 30503.0 |
| hypothetical protein | EHT87_10260 | Not Available | Positive | 2516489 - 2517364 | 32161.8 |
| hypothetical protein | EHT87_10265 | Not Available | Positive | 2517733 - 2518572 | 30302.3 |
| organic hydroperoxide resistance protein | EHT87_10270 | Not Available | Positive | 2518665 - 2519084 | 14585.3 |
| phage holin family protein | EHT87_10275 | Not Available | Negative | 2519169 - 2519585 | 14918.2 |
| class i sam-dependent methyltransferase | EHT87_10280 | Not Available | Positive | 2519667 - 2520413 | 27714.9 |
| dha2 family efflux mfs transporter permease subunit | EHT87_10285 | Not Available | Positive | 2520612 - 2522021 | 50369.2 |
| hypothetical protein | EHT87_10290 | Not Available | Negative | 2522131 - 2523837 | 62772.2 |
| hypothetical protein | EHT87_10295 | Not Available | Negative | 2523876 - 2526053 | 79331.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
