Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_10200 | Not Available | Negative | 2499934 - 2501349 | 51159.3 |
| susc/raga family tonb-linked outer membrane protein | EHT87_10205 | Not Available | Negative | 2501376 - 2504498 | 114328.0 |
| cystathionine gamma-synthase family protein | EHT87_10210 | Not Available | Positive | 2504614 - 2505825 | 43431.0 |
| serine hydrolase | EHT87_10215 | Not Available | Positive | 2505851 - 2506927 | 39206.2 |
| serine hydrolase | EHT87_10220 | Not Available | Positive | 2506929 - 2508422 | 56108.3 |
| type 1 glutamine amidotransferase | EHT87_10225 | Not Available | Positive | 2508477 - 2509046 | 21063.0 |
| arac family transcriptional regulator | EHT87_10230 | Not Available | Positive | 2509131 - 2509961 | 31540.0 |
| hypothetical protein | EHT87_10235 | Not Available | Positive | 2510193 - 2510999 | 30745.9 |
| ftsx-like permease family protein | EHT87_10240 | Not Available | Negative | 2511198 - 2513618 | 89577.2 |
| gtp 3',8-cyclase moaa | EHT87_10245 | Not Available | Negative | 2513874 - 2514854 | 36700.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
