Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_10100 | Not Available | Negative | 2481325 - 2481681 | 13536.2 |
| hypothetical protein | EHT87_10105 | Not Available | Negative | 2481748 - 2482359 | 21645.6 |
| hemin-degrading factor | EHT87_10110 | Not Available | Negative | 2482403 - 2483446 | 38763.5 |
| heme abc transporter atp-binding protein | EHT87_10115 | Not Available | Negative | 2483460 - 2484293 | 30743.5 |
| iron abc transporter permease | EHT87_10120 | Not Available | Negative | 2484389 - 2485495 | 38483.9 |
| hemin abc transporter substrate-binding protein | EHT87_10125 | Not Available | Negative | 2485514 - 2486377 | 30684.7 |
| hypothetical protein | EHT87_10130 | Not Available | Negative | 2486612 - 2486797 | 6379.55 |
| sigma-70 family rna polymerase sigma factor | EHT87_10135 | Not Available | Positive | 2486939 - 2487514 | 22342.4 |
| serine protease | EHT87_10140 | Not Available | Positive | 2487666 - 2488658 | 36951.2 |
| l-fucose:h+ symporter permease | EHT87_10145 | Not Available | Positive | 2488825 - 2490069 | 44876.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
