Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | EHT87_10050 | Not Available | Positive | 2466917 - 2468176 | 46846.5 |
| tolc family protein | EHT87_10055 | Not Available | Positive | 2468286 - 2469728 | 54912.7 |
| abc transporter atp-binding protein | EHT87_10060 | Not Available | Positive | 2469730 - 2470392 | 24546.8 |
| ftsx-like permease family protein | EHT87_10065 | Not Available | Positive | 2470476 - 2471723 | 46741.4 |
| ftsx-like permease family protein | EHT87_10070 | Not Available | Positive | 2471815 - 2472969 | 43126.8 |
| sigma-54-dependent fis family transcriptional regulator | EHT87_10075 | Not Available | Positive | 2473087 - 2474469 | 51681.5 |
| histidine kinase | EHT87_10080 | Not Available | Positive | 2474561 - 2475850 | 48959.5 |
| tonb-dependent receptor | EHT87_10085 | Not Available | Positive | 2476027 - 2478300 | 83873.0 |
| hypothetical protein | EHT87_10090 | Not Available | Positive | 2478454 - 2479848 | 49439.2 |
| hypothetical protein | EHT87_10095 | Not Available | Negative | 2479948 - 2481099 | 42969.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
