Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | EHT87_00950 | Not Available | Positive | 243761 - 246259 | 92587.7 |
| hypothetical protein | EHT87_00955 | Not Available | Negative | 246377 - 247087 | 26221.5 |
| sam-dependent methyltransferase | EHT87_00960 | Not Available | Negative | 247084 - 248331 | 46026.3 |
| sulp family inorganic anion transporter | EHT87_00965 | Not Available | Positive | 248472 - 250088 | 58222.1 |
| carbonic anhydrase | EHT87_00970 | Not Available | Positive | 250054 - 250737 | 26012.0 |
| tonb-dependent receptor | EHT87_00975 | Not Available | Negative | 250747 - 253314 | 95561.9 |
| cation transporter | EHT87_00980 | Not Available | Positive | 253447 - 254331 | 31316.0 |
| mfs transporter | EHT87_00985 | Not Available | Positive | 254494 - 256020 | 55913.6 |
| hypothetical protein | EHT87_00990 | Not Available | Positive | 256033 - 256254 | 8097.18 |
| acetate--coa ligase | EHT87_00995 | Not Available | Positive | 256302 - 258215 | 70978.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
