Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_09900 | Not Available | Positive | 2428627 - 2430474 | 69324.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | EHT87_09905 | Not Available | Positive | 2430493 - 2431737 | 45341.1 |
| d-2-hydroxyacid dehydrogenase | EHT87_09910 | Not Available | Positive | 2432011 - 2433024 | 37379.5 |
| tonb-dependent receptor | EHT87_09915 | Not Available | Positive | 2433529 - 2436720 | 116093.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_09920 | Not Available | Positive | 2436735 - 2438222 | 54690.1 |
| arac family transcriptional regulator | EHT87_09925 | Not Available | Negative | 2438282 - 2439151 | 33689.7 |
| rida family protein | EHT87_09930 | Not Available | Positive | 2439343 - 2439738 | 14253.0 |
| 3-hydroxyacyl-coa dehydrogenase family protein | EHT87_09935 | Not Available | Positive | 2439753 - 2440730 | 36885.3 |
| aspartate aminotransferase family protein | EHT87_09940 | Not Available | Positive | 2440762 - 2442081 | 48394.7 |
| 3-hydroxyacyl-coa dehydrogenase | EHT87_09945 | Not Available | Positive | 2442124 - 2443104 | 36980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
