Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EHT87_09850 | Not Available | Negative | 2411045 - 2412109 | 39018.2 |
| dipeptide epimerase | EHT87_09855 | Not Available | Negative | 2412152 - 2413168 | 37590.1 |
| hypothetical protein | EHT87_09860 | Not Available | Negative | 2413283 - 2414386 | 42854.1 |
| molybdopterin molybdenumtransferase moea | EHT87_09865 | Not Available | Negative | 2414452 - 2415669 | 44071.0 |
| pirin family protein | EHT87_09870 | Not Available | Negative | 2415768 - 2416622 | 31648.3 |
| duf3459 domain-containing protein | EHT87_09875 | Not Available | Positive | 2417234 - 2418799 | 59557.5 |
| right-handed parallel beta-helix repeat-containing protein | EHT87_09880 | Not Available | Negative | 2418796 - 2420670 | 70008.9 |
| hypothetical protein | EHT87_09885 | Not Available | Positive | 2420939 - 2424442 | 129397.0 |
| vcbs repeat-containing protein | EHT87_09890 | Not Available | Positive | 2424476 - 2425624 | 42304.5 |
| heme-binding protein | EHT87_09895 | Not Available | Positive | 2425880 - 2428564 | 98096.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
