Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(3-hydroxybutyrate) depolymerase | EHT87_09550 | Not Available | Positive | 2350105 - 2350968 | 32129.5 |
| bile acid:sodium symporter | EHT87_09555 | Not Available | Positive | 2351097 - 2352014 | 33258.8 |
| transcription initiation protein | EHT87_09560 | Not Available | Positive | 2352238 - 2352588 | 12659.0 |
| sigma-70 family rna polymerase sigma factor | EHT87_09565 | Not Available | Positive | 2352633 - 2353859 | 46902.0 |
| arginine-trna-protein transferase | EHT87_09570 | Not Available | Positive | 2353956 - 2354621 | 25996.8 |
| ybhb/ybcl family raf kinase inhibitor-like protein | EHT87_09575 | Not Available | Negative | 2354625 - 2355230 | 21042.3 |
| hypothetical protein | EHT87_09580 | Not Available | Negative | 2355393 - 2355815 | 17100.1 |
| hypothetical protein | EHT87_09585 | Not Available | Negative | 2356078 - 2357364 | 46264.5 |
| sdr family oxidoreductase | EHT87_09590 | Not Available | Positive | 2357773 - 2358804 | 37349.6 |
| esterase | EHT87_09595 | Not Available | Positive | 2358893 - 2359963 | 39338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
