Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EHT87_09050 | Not Available | Negative | 2229546 - 2230340 | 28157.6 |
| doxx family membrane protein | EHT87_09055 | Not Available | Positive | 2230500 - 2230847 | 13187.7 |
| n-acetyltransferase | EHT87_09060 | Not Available | Negative | 2230838 - 2231383 | 20575.5 |
| m13 family peptidase | EHT87_09065 | Not Available | Positive | 2231727 - 2233763 | 76884.0 |
| hypothetical protein | EHT87_09070 | Not Available | Negative | 2233823 - 2234482 | 24105.7 |
| aminotransferase class v-fold plp-dependent enzyme | EHT87_09075 | Not Available | Negative | 2234629 - 2235705 | 40236.1 |
| hypothetical protein | EHT87_09080 | Not Available | Negative | 2235712 - 2236092 | 14904.0 |
| phosphoglycerate dehydrogenase | EHT87_09085 | Not Available | Negative | 2236165 - 2238069 | 70776.1 |
| hypothetical protein | EHT87_09090 | Not Available | Negative | 2238289 - 2238519 | 8434.03 |
| alpha/beta fold hydrolase | EHT87_09095 | Not Available | Negative | 2238527 - 2239567 | 39344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
