Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | EHT87_09000 | Not Available | Negative | 2213518 - 2214180 | 24865.3 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_09005 | Not Available | Negative | 2214380 - 2215936 | 57190.6 |
| tonb-dependent receptor | EHT87_09010 | Not Available | Negative | 2215971 - 2219189 | 117533.0 |
| glycosidase | EHT87_09015 | Not Available | Negative | 2219954 - 2221441 | 56933.8 |
| glycosyltransferase | EHT87_09020 | Not Available | Negative | 2221547 - 2223847 | 85929.9 |
| patched family protein | EHT87_09025 | Not Available | Positive | 2224299 - 2226662 | 88069.8 |
| duf4286 family protein | EHT87_09030 | Not Available | Negative | 2226805 - 2227107 | 11917.4 |
| cytochrome b | EHT87_09035 | Not Available | Positive | 2227276 - 2227737 | 17491.0 |
| hypothetical protein | EHT87_09040 | Not Available | Positive | 2227815 - 2228312 | 19000.8 |
| glutathionylspermidine synthase family protein | EHT87_09045 | Not Available | Positive | 2228372 - 2229544 | 44146.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
