Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity iron permease family protein | EHT87_08895 | Not Available | Positive | 2185072 - 2185554 | 18338.2 |
| duf255 domain-containing protein | EHT87_08900 | Not Available | Positive | 2185680 - 2187035 | 50978.4 |
| glycosyltransferase family 2 protein | EHT87_08905 | Not Available | Negative | 2187087 - 2187959 | 34041.5 |
| type ix secretion system membrane protein porp/sprf | EHT87_08910 | Not Available | Negative | 2188063 - 2188983 | 33520.5 |
| flagellar motor protein motb | EHT87_08915 | Not Available | Negative | 2189023 - 2191389 | 88669.6 |
| type ix secretion system membrane protein porp/sprf | EHT87_08920 | Not Available | Negative | 2191641 - 2192633 | 36821.4 |
| duf11 domain-containing protein | EHT87_08925 | Not Available | Negative | 2192639 - 2200146 | 257570.0 |
| tyrosine--trna ligase | EHT87_08935 | Not Available | Negative | 2200715 - 2202001 | 48143.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | EHT87_08940 | Not Available | Negative | 2202115 - 2203323 | 46143.2 |
| hypothetical protein | EHT87_08945 | Not Available | Negative | 2203323 - 2203727 | 15152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
