Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vut family protein | EHT87_08690 | Not Available | Positive | 2139334 - 2140119 | 28853.6 |
| nuclear transport factor 2 family protein | EHT87_08695 | Not Available | Positive | 2140121 - 2140993 | 31893.3 |
| hypothetical protein | EHT87_08700 | Not Available | Negative | 2141123 - 2141539 | 15536.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_08705 | Not Available | Negative | 2141787 - 2143328 | 55866.1 |
| susc/raga family tonb-linked outer membrane protein | EHT87_08710 | Not Available | Negative | 2143352 - 2146549 | 115919.0 |
| dna-binding response regulator | EHT87_08715 | Not Available | Negative | 2146822 - 2147472 | 24340.7 |
| hypothetical protein | EHT87_08720 | Not Available | Negative | 2147597 - 2150815 | 121475.0 |
| rna methyltransferase | EHT87_08725 | Not Available | Negative | 2150996 - 2151751 | 28116.7 |
| outer membrane protein assembly factor | EHT87_08730 | Not Available | Positive | 2151777 - 2154401 | 100622.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EHT87_08735 | Not Available | Positive | 2154559 - 2155983 | 53914.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
