Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EHT87_08640 | Not Available | Negative | 2123551 - 2124468 | 35164.2 |
| deoxyribose-phosphate aldolase | EHT87_08645 | Not Available | Negative | 2124504 - 2125271 | 27513.2 |
| ribonuclease z | EHT87_08650 | Not Available | Positive | 2125329 - 2126240 | 34825.3 |
| t9ss c-terminal target domain-containing protein | EHT87_08655 | Not Available | Negative | 2126387 - 2129638 | 118657.0 |
| fad-binding oxidoreductase | EHT87_08660 | Not Available | Negative | 2129667 - 2130116 | 16817.3 |
| glutamate synthase large subunit | EHT87_08665 | Not Available | Positive | 2130861 - 2135432 | 169315.0 |
| duf29 domain-containing protein | EHT87_08670 | Not Available | Positive | 2135479 - 2135904 | 16567.6 |
| glutamate synthase subunit beta | EHT87_08675 | Not Available | Positive | 2135910 - 2137397 | 54459.0 |
| pyridoxal phosphate-dependent aminotransferase | EHT87_08680 | Not Available | Positive | 2137539 - 2138750 | 44928.1 |
| tigr03643 family protein | EHT87_08685 | Not Available | Negative | 2138799 - 2139095 | 11617.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
