Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | EHT87_08490 | Not Available | Positive | 2097003 - 2097527 | 19877.1 |
| nucleotidyltransferase family protein | EHT87_08495 | Not Available | Negative | 2097571 - 2098161 | 21489.8 |
| xdhc family protein | EHT87_08500 | Not Available | Negative | 2098250 - 2099260 | 37468.0 |
| trna pseudouridine(38-40) synthase trua | EHT87_08505 | Not Available | Negative | 2099299 - 2100075 | 29636.9 |
| uma2 family endonuclease | EHT87_08510 | Not Available | Negative | 2100072 - 2100677 | 23486.9 |
| phosphoribosylformylglycinamidine synthase subunit purl | EHT87_08515 | Not Available | Negative | 2100742 - 2102994 | 81639.0 |
| aminotransferase class i and ii | EHT87_08520 | Not Available | Positive | 2103181 - 2103975 | 29730.6 |
| duf3037 domain-containing protein | EHT87_08525 | Not Available | Positive | 2103956 - 2104336 | 14256.4 |
| hypothetical protein | EHT87_08530 | Not Available | Positive | 2104896 - 2105147 | 9812.65 |
| hypothetical protein | EHT87_08535 | Not Available | Negative | 2105643 - 2105882 | 9086.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
