Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT87_00800 | Not Available | Negative | 200445 - 202703 | 84579.1 |
| hypothetical protein | EHT87_00805 | Not Available | Negative | 202785 - 203246 | 16736.6 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_00810 | Not Available | Negative | 203428 - 205167 | 63361.6 |
| tonb-dependent receptor | EHT87_00815 | Not Available | Negative | 205196 - 208453 | 116936.0 |
| rna-binding protein | EHT87_00820 | Not Available | Positive | 208839 - 212471 | 133466.0 |
| duf4494 domain-containing protein | EHT87_00825 | Not Available | Negative | 212535 - 213017 | 18489.9 |
| duf2807 domain-containing protein | EHT87_00830 | Not Available | Positive | 213288 - 214055 | 27690.1 |
| hypothetical protein | EHT87_00835 | Not Available | Positive | 214079 - 215080 | 37880.7 |
| dna-binding response regulator | EHT87_00840 | Not Available | Positive | 215118 - 215891 | 30009.2 |
| abc transporter permease | EHT87_00845 | Not Available | Negative | 215952 - 217286 | 49621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
