Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_08340 | Not Available | Positive | 2060580 - 2060819 | 8901.67 |
| pin domain-containing protein | EHT87_08345 | Not Available | Positive | 2060819 - 2061190 | 14092.0 |
| gtp-binding protein | EHT87_08350 | Not Available | Positive | 2061248 - 2062501 | 46252.2 |
| hepn domain-containing protein | EHT87_08355 | Not Available | Positive | 2062759 - 2064930 | 80452.4 |
| uroporphyrinogen-iii c-methyltransferase | EHT87_08360 | Not Available | Positive | 2065018 - 2065770 | 26964.5 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | EHT87_08365 | Not Available | Positive | 2065885 - 2066454 | 21210.8 |
| hypothetical protein | EHT87_08370 | Not Available | Negative | 2066451 - 2066786 | 13411.7 |
| osmc family peroxiredoxin | EHT87_08375 | Not Available | Positive | 2066922 - 2067338 | 15178.3 |
| thymidylate synthase | EHT87_08380 | Not Available | Positive | 2067502 - 2068296 | 30552.8 |
| hypothetical protein | EHT87_08385 | Not Available | Negative | 2068368 - 2068652 | 11437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
