Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_08290 | Not Available | Negative | 2050374 - 2051864 | 54814.6 |
| hypothetical protein | EHT87_08295 | Not Available | Negative | 2051936 - 2053006 | 39398.6 |
| s8 family peptidase | EHT87_08300 | Not Available | Positive | 2053204 - 2054376 | 40209.3 |
| sulfite exporter taue/safe family protein | EHT87_08305 | Not Available | Positive | 2054607 - 2055665 | 37553.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EHT87_08310 | Not Available | Positive | 2055756 - 2056949 | 43625.1 |
| upf0175 family protein | EHT87_08315 | Not Available | Positive | 2056995 - 2057222 | 8420.2 |
| duf3368 domain-containing protein | EHT87_08320 | Not Available | Positive | 2057215 - 2057673 | 16974.7 |
| gfo/idh/moca family oxidoreductase | EHT87_08325 | Not Available | Positive | 2057675 - 2058784 | 41128.8 |
| phosphoadenylyl-sulfate reductase | EHT87_08330 | Not Available | Positive | 2058845 - 2059558 | 27467.6 |
| sulfate adenylyltransferase subunit cysd | EHT87_08335 | Not Available | Positive | 2059659 - 2060567 | 34668.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
