Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | EHT87_08190 | Not Available | Negative | 2026598 - 2029018 | 92035.2 |
| response regulator | EHT87_08195 | Not Available | Negative | 2029030 - 2029431 | 15139.6 |
| dihydroxy-acid dehydratase | EHT87_08200 | Not Available | Positive | 2029604 - 2031310 | 61749.6 |
| sugar phosphate isomerase/epimerase | EHT87_08205 | Not Available | Negative | 2031420 - 2032355 | 33811.9 |
| duf4126 domain-containing protein | EHT87_08210 | Not Available | Positive | 2032646 - 2033215 | 19801.8 |
| peptidase m19 | EHT87_08215 | Not Available | Negative | 2033218 - 2034306 | 40211.6 |
| membrane or secreted protein | EHT87_08220 | Not Available | Negative | 2034362 - 2035078 | 26591.0 |
| n-acetyltransferase | EHT87_08225 | Not Available | Positive | 2035494 - 2035802 | 11853.2 |
| porin family protein | EHT87_08230 | Not Available | Positive | 2036251 - 2036793 | 18961.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EHT87_08235 | Not Available | Positive | 2036922 - 2037953 | 37690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
