Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | EHT87_08035 | Not Available | Negative | 1990884 - 1991654 | 27638.2 |
| gfo/idh/moca family oxidoreductase | EHT87_08040 | Not Available | Negative | 1991752 - 1992870 | 41962.3 |
| sugar phosphate isomerase/epimerase | EHT87_08045 | Not Available | Negative | 1992941 - 1993819 | 32525.3 |
| glycosyl hydrolase | EHT87_08050 | Not Available | Negative | 1993816 - 1995198 | 51732.6 |
| hypothetical protein | EHT87_08055 | Not Available | Negative | 1995350 - 1997413 | 75893.1 |
| blai/meci/copy family transcriptional regulator | EHT87_08060 | Not Available | Negative | 1997418 - 1997789 | 14033.9 |
| leucine-rich repeat domain-containing protein | EHT87_08065 | Not Available | Positive | 1998038 - 1999501 | 55933.3 |
| acyl-coa thioesterase | EHT87_08070 | Not Available | Negative | 1999547 - 2000080 | 21195.1 |
| duf2147 domain-containing protein | EHT87_08075 | Not Available | Positive | 2000277 - 2000726 | 16937.4 |
| csbd family protein | EHT87_08080 | Not Available | Positive | 2000863 - 2001048 | 6886.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
