Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EHT87_07630 | Not Available | Negative | 1872756 - 1873730 | 37060.7 |
| tonb-dependent receptor | EHT87_07635 | Not Available | Positive | 1874052 - 1877165 | 113066.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_07640 | Not Available | Positive | 1877179 - 1878642 | 54161.9 |
| plasmid stabilization protein | EHT87_07645 | Not Available | Positive | 1879018 - 1879323 | 10731.2 |
| alpha-amylase | EHT87_07650 | Not Available | Positive | 1879380 - 1880987 | 61370.8 |
| malto-oligosyltrehalose trehalohydrolase | EHT87_07655 | Not Available | Positive | 1880994 - 1882850 | 69988.3 |
| duf421 domain-containing protein | EHT87_07660 | Not Available | Negative | 1882863 - 1883558 | 25612.7 |
| duf421 domain-containing protein | EHT87_07665 | Not Available | Negative | 1883567 - 1884256 | 25357.3 |
| trehalose synthase | EHT87_07670 | Not Available | Positive | 1884439 - 1886175 | 66699.9 |
| 3-hydroxybutyrate dehydrogenase | EHT87_07675 | Not Available | Negative | 1886188 - 1886961 | 27421.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
