Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 | EHT87_07530 | Not Available | Negative | 1850507 - 1852432 | 72598.0 |
| hypothetical protein | EHT87_07535 | Not Available | Negative | 1852470 - 1852835 | 13270.5 |
| ferritin-like domain-containing protein | EHT87_07540 | Not Available | Negative | 1852935 - 1853423 | 18058.3 |
| sdr family nad(p)-dependent oxidoreductase | EHT87_07545 | Not Available | Negative | 1853469 - 1854503 | 37238.7 |
| frg domain-containing protein | EHT87_07550 | Not Available | Negative | 1854681 - 1855475 | 30844.9 |
| nudix hydrolase | EHT87_07555 | Not Available | Negative | 1855511 - 1856194 | 25572.3 |
| hypothetical protein | EHT87_07560 | Not Available | Negative | 1856282 - 1856803 | 20144.2 |
| response regulator | EHT87_07565 | Not Available | Positive | 1857016 - 1857489 | 18104.7 |
| duf1264 domain-containing protein | EHT87_07570 | Not Available | Negative | 1857500 - 1858279 | 28712.3 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | EHT87_07575 | Not Available | Negative | 1858272 - 1859024 | 27140.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
