Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | EHT87_00700 | Not Available | Positive | 177473 - 178570 | 41703.3 |
| duf4369 domain-containing protein | EHT87_00705 | Not Available | Positive | 178794 - 179510 | 27018.6 |
| hypothetical protein | EHT87_00710 | Not Available | Negative | 179856 - 180311 | 16285.7 |
| heparinase | EHT87_00715 | Not Available | Negative | 180390 - 182267 | 69917.2 |
| gfo/idh/moca family oxidoreductase | EHT87_00720 | Not Available | Positive | 182461 - 183831 | 51402.0 |
| hypothetical protein | EHT87_00725 | Not Available | Positive | 183832 - 185547 | 63392.6 |
| duf1080 domain-containing protein | EHT87_00730 | Not Available | Negative | 185587 - 186225 | 24217.3 |
| pas domain s-box protein | EHT87_00735 | Not Available | Positive | 186376 - 188457 | 78863.5 |
| hypothetical protein | EHT87_00740 | Not Available | Negative | 188519 - 189445 | 33742.4 |
| response regulator | EHT87_00745 | Not Available | Positive | 189667 - 190038 | 13406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
