Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | EHT87_07280 | Not Available | Negative | 1791121 - 1792212 | 40461.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | EHT87_07285 | Not Available | Negative | 1792307 - 1792933 | 22925.6 |
| gmc family oxidoreductase | EHT87_07290 | Not Available | Negative | 1793041 - 1794783 | 63308.4 |
| sigma-70 family rna polymerase sigma factor | EHT87_07295 | Not Available | Negative | 1794925 - 1796163 | 46545.2 |
| hypothetical protein | EHT87_07300 | Not Available | Negative | 1796255 - 1796608 | 12829.5 |
| threonylcarbamoyl-amp synthase | EHT87_07305 | Not Available | Positive | 1796917 - 1797873 | 34516.1 |
| vwa domain-containing protein | EHT87_07310 | Not Available | Positive | 1798109 - 1800769 | 99587.3 |
| dna-binding response regulator | EHT87_07315 | Not Available | Positive | 1801021 - 1801662 | 23763.2 |
| hypothetical protein | EHT87_07320 | Not Available | Positive | 1801696 - 1802037 | 12687.0 |
| tetratricopeptide repeat protein | EHT87_07325 | Not Available | Negative | 1802061 - 1804028 | 74375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
