Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | EHT87_07230 | Not Available | Negative | 1782537 - 1783364 | 32680.2 |
| glutathione-dependent formaldehyde dehydrogenase | EHT87_07235 | Not Available | Negative | 1783495 - 1784670 | 42442.0 |
| duf2892 domain-containing protein | EHT87_07240 | Not Available | Negative | 1784651 - 1785496 | 31225.3 |
| 30s ribosomal protein thx | EHT87_07245 | Not Available | Positive | 1785722 - 1785838 | 4300.4 |
| hypothetical protein | EHT87_07250 | Not Available | Positive | 1786029 - 1786283 | 9257.22 |
| hypothetical protein | EHT87_07255 | Not Available | Positive | 1786280 - 1786717 | 16380.8 |
| tetratricopeptide repeat protein | EHT87_07260 | Not Available | Positive | 1786778 - 1788727 | 73324.4 |
| uma2 family endonuclease | EHT87_07265 | Not Available | Positive | 1788771 - 1789352 | 22250.7 |
| pyridoxamine 5'-phosphate oxidase family protein | EHT87_07270 | Not Available | Positive | 1789361 - 1789918 | 20666.9 |
| gliding motility-associated c-terminal domain-containing protein | EHT87_07275 | Not Available | Negative | 1789919 - 1791103 | 42982.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
