Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase family protein | EHT87_07180 | Not Available | Negative | 1767468 - 1768430 | 36086.2 |
| rida family protein | EHT87_07185 | Not Available | Negative | 1768427 - 1768819 | 13870.5 |
| creatininase family protein | EHT87_07190 | Not Available | Negative | 1768816 - 1769613 | 29044.6 |
| glycoside hydrolase | EHT87_07195 | Not Available | Negative | 1769720 - 1771789 | 78929.4 |
| heparinase | EHT87_07200 | Not Available | Negative | 1771818 - 1773722 | 71414.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_07205 | Not Available | Negative | 1773798 - 1775384 | 58752.6 |
| susc/raga family tonb-linked outer membrane protein | EHT87_07210 | Not Available | Negative | 1775396 - 1778587 | 115200.0 |
| gntr family transcriptional regulator | EHT87_07215 | Not Available | Negative | 1779133 - 1779771 | 24285.4 |
| sugar phosphate isomerase/epimerase | EHT87_07220 | Not Available | Positive | 1780016 - 1780924 | 33196.9 |
| hypothetical protein | EHT87_07225 | Not Available | Positive | 1780954 - 1782531 | 58116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
