Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | EHT87_07130 | Not Available | Positive | 1756510 - 1757220 | 26518.4 |
| high-potential iron-sulfur protein | EHT87_07135 | Not Available | Negative | 1757229 - 1757585 | 12804.3 |
| dehydrogenase | EHT87_07140 | Not Available | Negative | 1757598 - 1759598 | 74327.9 |
| hypothetical protein | EHT87_07145 | Not Available | Negative | 1759628 - 1761034 | 51751.9 |
| gfo/idh/moca family oxidoreductase | EHT87_07150 | Not Available | Negative | 1761113 - 1762525 | 52581.1 |
| hypothetical protein | EHT87_07155 | Not Available | Negative | 1762548 - 1763633 | 41037.0 |
| sdr family oxidoreductase | EHT87_07160 | Not Available | Negative | 1763680 - 1764423 | 26358.9 |
| dihydrodipicolinate synthase family protein | EHT87_07165 | Not Available | Negative | 1764450 - 1765403 | 34942.4 |
| dmt family transporter | EHT87_07170 | Not Available | Negative | 1765406 - 1766341 | 34856.7 |
| muconate lactonizing mandelate racemase | EHT87_07175 | Not Available | Negative | 1766338 - 1767471 | 42304.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
