Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf11 domain-containing protein | EHT87_06975 | Not Available | Negative | 1707418 - 1712238 | 159791.0 |
| lyttr family transcriptional regulator | EHT87_06980 | Not Available | Negative | 1712413 - 1712832 | 16277.3 |
| response regulator | EHT87_06985 | Not Available | Negative | 1713004 - 1717071 | 153538.0 |
| phospholipase c, phosphocholine-specific | EHT87_06995 | Not Available | Positive | 1718486 - 1721068 | 97676.0 |
| bluf domain-containing protein | EHT87_07000 | Not Available | Negative | 1721190 - 1721612 | 15848.0 |
| response regulator | EHT87_07005 | Not Available | Positive | 1721916 - 1722329 | 15728.2 |
| hypothetical protein | EHT87_07010 | Not Available | Positive | 1722385 - 1722612 | 8719.48 |
| duf1059 domain-containing protein | EHT87_07015 | Not Available | Negative | 1722788 - 1722958 | 6034.98 |
| na+/h+ antiporter | EHT87_07020 | Not Available | Negative | 1723091 - 1724362 | 45999.1 |
| gfo/idh/moca family oxidoreductase | EHT87_07025 | Not Available | Negative | 1724483 - 1725943 | 54358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
