Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_06875 | Not Available | Positive | 1682338 - 1682991 | 23957.0 |
| type ii toxin-antitoxin system vapb family antitoxin | EHT87_06880 | Not Available | Positive | 1683055 - 1683255 | 7874.43 |
| pin domain nuclease | EHT87_06885 | Not Available | Positive | 1683248 - 1683667 | 16413.7 |
| gfo/idh/moca family oxidoreductase | EHT87_06890 | Not Available | Positive | 1683732 - 1684814 | 39744.4 |
| thioredoxin family protein | EHT87_06895 | Not Available | Positive | 1684901 - 1685419 | 19298.3 |
| hypothetical protein | EHT87_06900 | Not Available | Positive | 1685426 - 1686217 | 29846.4 |
| duf4374 domain-containing protein | EHT87_06905 | Not Available | Negative | 1686302 - 1687531 | 43842.6 |
| amino acid adenylation domain-containing protein | EHT87_06910 | Not Available | Negative | 1687665 - 1693631 | 221890.0 |
| endonuclease | EHT87_06915 | Not Available | Negative | 1693726 - 1694802 | 41480.1 |
| scyd/scye family protein | EHT87_06920 | Not Available | Positive | 1695304 - 1696350 | 36586.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
