Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EHT87_06825 | Not Available | Negative | 1670458 - 1671339 | 31768.8 |
| 6-phosphogluconolactonase | EHT87_06830 | Not Available | Negative | 1671496 - 1672230 | 26829.8 |
| glucose-6-phosphate dehydrogenase | EHT87_06835 | Not Available | Negative | 1672227 - 1673744 | 57974.9 |
| nadp-dependent phosphogluconate dehydrogenase | EHT87_06840 | Not Available | Negative | 1673741 - 1675168 | 52287.1 |
| had family phosphatase | EHT87_06845 | Not Available | Negative | 1675155 - 1675805 | 25422.5 |
| transaldolase | EHT87_06850 | Not Available | Negative | 1675808 - 1676911 | 40566.2 |
| ribose 5-phosphate isomerase b | EHT87_06855 | Not Available | Negative | 1676985 - 1677431 | 16055.3 |
| transketolase | EHT87_06860 | Not Available | Negative | 1677529 - 1679538 | 74098.3 |
| s9 family peptidase | EHT87_06865 | Not Available | Positive | 1679744 - 1681864 | 77087.2 |
| duf4377 domain-containing protein | EHT87_06870 | Not Available | Positive | 1681985 - 1682314 | 12410.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
