Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | EHT87_06625 | Not Available | Positive | 1622230 - 1623471 | 48075.6 |
| gnat family n-acetyltransferase | EHT87_06630 | Not Available | Negative | 1623621 - 1624028 | 15360.4 |
| (2fe-2s)-binding protein | EHT87_06635 | Not Available | Positive | 1624191 - 1624649 | 16215.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EHT87_06640 | Not Available | Positive | 1624773 - 1626917 | 77790.2 |
| transcription elongation factor greab | EHT87_06645 | Not Available | Positive | 1627041 - 1627562 | 18645.1 |
| hypothetical protein | EHT87_06650 | Not Available | Positive | 1627708 - 1628154 | 17001.7 |
| duf4403 family protein | EHT87_06655 | Not Available | Positive | 1628280 - 1629665 | 51200.6 |
| esterase family protein | EHT87_06660 | Not Available | Negative | 1629671 - 1630540 | 33523.4 |
| coce/nond family hydrolase | EHT87_06665 | Not Available | Positive | 1630656 - 1632527 | 70623.8 |
| zinc-dependent peptidase | EHT87_06670 | Not Available | Positive | 1632626 - 1633402 | 29288.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
