Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | EHT87_06575 | Not Available | Negative | 1612163 - 1614343 | 81402.9 |
| caspase family protein | EHT87_06580 | Not Available | Negative | 1614392 - 1615171 | 28546.2 |
| serine/threonine-protein phosphatase | EHT87_06585 | Not Available | Negative | 1615177 - 1615986 | 29668.1 |
| fha domain-containing protein | EHT87_06590 | Not Available | Negative | 1615990 - 1616592 | 22105.5 |
| hypothetical protein | EHT87_06595 | Not Available | Negative | 1616598 - 1617542 | 33662.3 |
| fha domain-containing protein | EHT87_06600 | Not Available | Negative | 1617627 - 1618403 | 28743.9 |
| duf1080 domain-containing protein | EHT87_06605 | Not Available | Negative | 1619204 - 1620184 | 37246.5 |
| duf2236 domain-containing protein | EHT87_06610 | Not Available | Negative | 1620236 - 1621144 | 35844.2 |
| carboxymuconolactone decarboxylase family protein | EHT87_06615 | Not Available | Positive | 1621312 - 1621785 | 17599.8 |
| transcription initiation protein | EHT87_06620 | Not Available | Positive | 1621842 - 1622180 | 12105.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
