Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane dipeptidase | EHT87_06475 | Not Available | Positive | 1586085 - 1587359 | 46696.2 |
| ngg1p interacting factor nif3 | EHT87_06480 | Not Available | Positive | 1587616 - 1588524 | 33848.4 |
| hypothetical protein | EHT87_06485 | Not Available | Negative | 1588552 - 1588734 | 6744.6 |
| tonb-dependent receptor | EHT87_06490 | Not Available | Positive | 1589193 - 1592237 | 110232.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_06495 | Not Available | Positive | 1592353 - 1593975 | 60171.8 |
| sialate o-acetylesterase | EHT87_06500 | Not Available | Negative | 1594109 - 1595512 | 51893.0 |
| arylsulfatase | EHT87_06505 | Not Available | Negative | 1595586 - 1596896 | 48355.8 |
| acetylxylan esterase | EHT87_06510 | Not Available | Positive | 1597122 - 1598291 | 42616.4 |
| fad-binding oxidoreductase | EHT87_06515 | Not Available | Positive | 1598751 - 1599884 | 41552.0 |
| rida family protein | EHT87_06520 | Not Available | Positive | 1599941 - 1600465 | 18368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
