Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT87_00600 | Not Available | Negative | 154344 - 155990 | 60986.2 |
| tonb-dependent receptor | EHT87_00605 | Not Available | Negative | 156011 - 159460 | 126074.0 |
| duf4974 domain-containing protein | EHT87_00610 | Not Available | Negative | 159513 - 160517 | 38410.4 |
| rna polymerase sigma-70 factor | EHT87_00615 | Not Available | Negative | 160587 - 161291 | 27162.3 |
| arabinose isomerase | EHT87_00620 | Not Available | Positive | 161520 - 163013 | 54285.1 |
| arac family transcriptional regulator | EHT87_00625 | Not Available | Positive | 163243 - 163803 | 21664.6 |
| duf3494 domain-containing protein | EHT87_00630 | Not Available | Positive | 163901 - 165127 | 42504.4 |
| polysaccharide biosynthesis protein | EHT87_00635 | Not Available | Positive | 165286 - 167208 | 72088.1 |
| dna-binding response regulator | EHT87_00640 | Not Available | Positive | 167254 - 167883 | 23829.0 |
| response regulator | EHT87_00645 | Not Available | Positive | 168054 - 168479 | 16464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
