Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT87_06225 | Not Available | Positive | 1518159 - 1519862 | 64184.7 |
| spor domain-containing protein | EHT87_06230 | Not Available | Positive | 1519885 - 1520976 | 40202.8 |
| hypothetical protein | EHT87_06235 | Not Available | Positive | 1521128 - 1522063 | 33151.1 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | EHT87_06240 | Not Available | Positive | 1522069 - 1523361 | 46930.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EHT87_06245 | Not Available | Positive | 1523358 - 1524020 | 25812.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EHT87_06250 | Not Available | Negative | 1524052 - 1525041 | 35050.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EHT87_06255 | Not Available | Positive | 1526078 - 1526896 | 29023.0 |
| xre family transcriptional regulator | EHT87_06260 | Not Available | Positive | 1527096 - 1527512 | 15937.9 |
| tonb-dependent receptor | EHT87_06265 | Not Available | Positive | 1527836 - 1529755 | 72404.4 |
| duf5074 domain-containing protein | EHT87_06270 | Not Available | Positive | 1529752 - 1530870 | 39925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
