Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | EHT87_06175 | Not Available | Positive | 1504293 - 1504688 | 15185.6 |
| yjgp/yjgq family permease | EHT87_06180 | Not Available | Positive | 1504696 - 1506210 | 57484.3 |
| 30s ribosomal protein s15 | EHT87_06185 | Not Available | Positive | 1506301 - 1506576 | 10628.0 |
| polyribonucleotide nucleotidyltransferase | EHT87_06190 | Not Available | Positive | 1506773 - 1508914 | 78145.1 |
| sigma-70 family rna polymerase sigma factor | EHT87_06195 | Not Available | Positive | 1509032 - 1509895 | 32666.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EHT87_06200 | Not Available | Positive | 1510005 - 1511747 | 65335.5 |
| tetratricopeptide repeat protein | EHT87_06205 | Not Available | Negative | 1511744 - 1512778 | 39334.1 |
| hypothetical protein | EHT87_06210 | Not Available | Positive | 1512846 - 1513091 | 9839.69 |
| m61 family peptidase | EHT87_06215 | Not Available | Negative | 1513093 - 1514946 | 69005.0 |
| outer membrane protein assembly factor bamd | EHT87_06220 | Not Available | Positive | 1515052 - 1518084 | 113845.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
