Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1484352 - 1484427 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1484507 - 1484582 | Not Available |
| hypothetical protein | EHT87_06085 | Not Available | Positive | 1484697 - 1485431 | 28512.8 |
| sdr family oxidoreductase | EHT87_06090 | Not Available | Negative | 1485520 - 1486335 | 29584.2 |
| chrd domain-containing protein | EHT87_06095 | Not Available | Positive | 1486514 - 1486969 | 15940.1 |
| gliding motility-associated c-terminal domain-containing protein | EHT87_06100 | Not Available | Negative | 1487029 - 1489275 | 83136.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EHT87_06105 | Not Available | Positive | 1489344 - 1490795 | 54128.9 |
| replicative dna helicase | EHT87_06110 | Not Available | Negative | 1490859 - 1492493 | 59879.4 |
| phoh family protein | EHT87_06115 | Not Available | Positive | 1492862 - 1493809 | 35236.9 |
| t9ss c-terminal target domain-containing protein | EHT87_06120 | Not Available | Positive | 1493739 - 1495118 | 51869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
