Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | EHT87_05925 | Not Available | Positive | 1453579 - 1454784 | 44930.9 |
| hypothetical protein | EHT87_05930 | Not Available | Negative | 1454801 - 1455349 | 21446.4 |
| mmcq/yjbr family dna-binding protein | EHT87_05935 | Not Available | Negative | 1455414 - 1455767 | 13197.9 |
| hypothetical protein | EHT87_05940 | Not Available | Negative | 1455764 - 1455952 | 7409.48 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EHT87_05945 | Not Available | Negative | 1456033 - 1458057 | 75161.8 |
| ghmp kinase | EHT87_05950 | Not Available | Negative | 1458213 - 1459289 | 39188.6 |
| glucose/galactose mfs transporter | EHT87_05955 | Not Available | Negative | 1459289 - 1460521 | 43985.0 |
| gfo/idh/moca family oxidoreductase | EHT87_05960 | Not Available | Negative | 1460639 - 1461997 | 50497.2 |
| 6-carboxytetrahydropterin synthase | EHT87_05965 | Not Available | Positive | 1462335 - 1462751 | 16260.2 |
| gtp cyclohydrolase i fole | EHT87_05970 | Not Available | Positive | 1462714 - 1463448 | 27383.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
