Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_05875 | Not Available | Positive | 1445057 - 1445626 | 22158.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EHT87_05880 | Not Available | Positive | 1445672 - 1446373 | 26050.7 |
| duf4159 domain-containing protein | EHT87_05885 | Not Available | Positive | 1446376 - 1447047 | 25622.5 |
| acyl-coa desaturase | EHT87_05890 | Not Available | Positive | 1447173 - 1447985 | 32237.9 |
| 5'(3')-deoxyribonucleotidase | EHT87_05895 | Not Available | Negative | 1448145 - 1448672 | 20492.3 |
| hypothetical protein | EHT87_05900 | Not Available | Negative | 1448672 - 1449286 | 22047.5 |
| 2-oxo acid dehydrogenase subunit e2 | EHT87_05905 | Not Available | Negative | 1449418 - 1450743 | 47835.5 |
| competence/damage-inducible protein a | EHT87_05910 | Not Available | Negative | 1450797 - 1452050 | 45792.0 |
| duf4197 domain-containing protein | EHT87_05915 | Not Available | Positive | 1452243 - 1452995 | 27117.7 |
| gliding motility protein gldc | EHT87_05920 | Not Available | Positive | 1453161 - 1453511 | 13239.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
