Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EHT87_05825 | Not Available | Negative | 1431567 - 1432148 | 22186.5 |
| hypothetical protein | EHT87_05830 | Not Available | Positive | 1432274 - 1433002 | 27678.7 |
| acyl-coa reductase | EHT87_05835 | Not Available | Negative | 1433082 - 1434101 | 38314.7 |
| 4fe-4s dicluster domain-containing protein | EHT87_05840 | Not Available | Positive | 1434288 - 1434641 | 12681.7 |
| porin | EHT87_05845 | Not Available | Positive | 1435004 - 1436221 | 43752.1 |
| ammonium transporter | EHT87_05850 | Not Available | Positive | 1436288 - 1437616 | 46766.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | EHT87_05855 | Not Available | Negative | 1437764 - 1439113 | 50473.4 |
| alkaline phosphatase family protein | EHT87_05860 | Not Available | Negative | 1439210 - 1441042 | 68257.9 |
| glutamine synthetase type iii | EHT87_05865 | Not Available | Positive | 1441361 - 1443550 | 80940.6 |
| m28 family peptidase | EHT87_05870 | Not Available | Positive | 1443755 - 1444963 | 45146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
