Larkinella knui str. KCTC42998

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Larkinella

Description

Larkinella knui strain KCTC42998 is a bacterial species characterized by a single replicon. The genomic data for this strain is accessible under the accession number RQJP00000000.1. This information indicates that Larkinella knui has a streamlined genomic structure, which may contribute to its adaptability in various environments. As a member of the Larkinella genus, Larkinella knui is part of a group of bacteria known for their diverse ecological roles. The presence of a single replicon in its genome suggests a relatively simple replication mechanism, which can be advantageous for rapid growth and adaptation to changing environmental conditions. Additionally, the characteristics of the Larkinella genus often include involvement in biogeochemical cycles, although specific ecological roles of Larkinella knui strain KCTC42998 are not detailed in the provided information. Understanding the genomic structure and traits of Larkinella knui could provide insights into its ecological functions and potential applications in biotechnology or environmental management. The single replicon may allow for efficient gene regulation and expression, making it a subject of interest for studies on microbial adaptation and resilience. Further research may reveal more about the ecological impacts and biotechnological potential of this strain in its natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusLarkinella
SpeciesLarkinella knui
StrainKCTC42998

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Larkinella knui strain KCTC42998

Gene Summary

Adenine Count

1854750 bp

Thymine Count

1865285 bp

Guanine Count

1965966 bp

Cytosine Count

1966621 bp

Genome Length

7653530 bp

Protein-coding Genes

6118 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l25/general stress protein ctcEHT87_05675Not AvailablePositive1387271 - 138783420646.3
sodium-translocating pyrophosphataseEHT87_05680Not AvailableNegative1388007 - 139069194004.0
pig-l family deacetylaseEHT87_05685Not AvailablePositive1390916 - 139343893050.3
5-oxoprolinaseEHT87_05690Not AvailablePositive1393543 - 1397322136715.0
cyclase family proteinEHT87_05695Not AvailablePositive1397319 - 139798425214.1
divalent metal cation transporterEHT87_05700Not AvailablePositive1398077 - 139927041548.8
hypothetical proteinEHT87_05705Not AvailablePositive1399363 - 140016630581.6
dna polymerase iii subunit alphaEHT87_05710Not AvailablePositive1400457 - 1404029135254.0
thioredoxinEHT87_05715Not AvailablePositive1404104 - 140442411509.3
penicillin acylase family proteinEHT87_05720Not AvailablePositive1404577 - 140676682468.2

Displaying genes 1131 – 1140 of 6167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.