Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | EHT87_05675 | Not Available | Positive | 1387271 - 1387834 | 20646.3 |
| sodium-translocating pyrophosphatase | EHT87_05680 | Not Available | Negative | 1388007 - 1390691 | 94004.0 |
| pig-l family deacetylase | EHT87_05685 | Not Available | Positive | 1390916 - 1393438 | 93050.3 |
| 5-oxoprolinase | EHT87_05690 | Not Available | Positive | 1393543 - 1397322 | 136715.0 |
| cyclase family protein | EHT87_05695 | Not Available | Positive | 1397319 - 1397984 | 25214.1 |
| divalent metal cation transporter | EHT87_05700 | Not Available | Positive | 1398077 - 1399270 | 41548.8 |
| hypothetical protein | EHT87_05705 | Not Available | Positive | 1399363 - 1400166 | 30581.6 |
| dna polymerase iii subunit alpha | EHT87_05710 | Not Available | Positive | 1400457 - 1404029 | 135254.0 |
| thioredoxin | EHT87_05715 | Not Available | Positive | 1404104 - 1404424 | 11509.3 |
| penicillin acylase family protein | EHT87_05720 | Not Available | Positive | 1404577 - 1406766 | 82468.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
