Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | EHT87_05475 | Not Available | Negative | 1339886 - 1341763 | 71113.4 |
| alpha-amylase | EHT87_05480 | Not Available | Positive | 1341963 - 1343777 | 68672.0 |
| hypothetical protein | EHT87_05485 | Not Available | Positive | 1343885 - 1344121 | 8727.56 |
| type ii toxin-antitoxin system vapc family toxin | EHT87_05490 | Not Available | Positive | 1344118 - 1344525 | 15670.1 |
| duf1460 domain-containing protein | EHT87_05495 | Not Available | Positive | 1344651 - 1345547 | 33846.7 |
| gntr family transcriptional regulator | EHT87_05500 | Not Available | Negative | 1345520 - 1346536 | 39130.3 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EHT87_05505 | Not Available | Negative | 1346546 - 1347370 | 30517.7 |
| duf2452 domain-containing protein | EHT87_05510 | Not Available | Negative | 1347498 - 1347956 | 17432.7 |
| o-succinylbenzoic acid--coa ligase | EHT87_05515 | Not Available | Positive | 1348143 - 1349231 | 39664.0 |
| hypothetical protein | EHT87_05520 | Not Available | Positive | 1349248 - 1350027 | 29757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
