Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | EHT87_05375 | Not Available | Positive | 1319652 - 1320206 | 21339.8 |
| eve domain-containing protein | EHT87_05380 | Not Available | Positive | 1320266 - 1320676 | 15436.5 |
| oxidoreductase | EHT87_05385 | Not Available | Positive | 1320684 - 1321565 | 33665.3 |
| udp-n-acetylglucosamine-peptide n-acetylglucosaminyltransferase | EHT87_05390 | Not Available | Positive | 1321655 - 1322827 | 44510.2 |
| threonine--trna ligase | EHT87_05395 | Not Available | Positive | 1322900 - 1324849 | 74206.5 |
| translation initiation factor if-3 | EHT87_05400 | Not Available | Positive | 1325048 - 1325608 | 21406.4 |
| 50s ribosomal protein l35 | EHT87_05405 | Not Available | Positive | 1325742 - 1325939 | 7525.51 |
| 50s ribosomal protein l20 | EHT87_05410 | Not Available | Positive | 1326127 - 1326471 | 13043.2 |
| nuclease | EHT87_05415 | Not Available | Negative | 1326509 - 1326925 | 16015.7 |
| hypothetical protein | EHT87_05420 | Not Available | Positive | 1327071 - 1327640 | 19314.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
