Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_05325 | Not Available | Negative | 1311123 - 1311467 | 13220.9 |
| sdr family oxidoreductase | EHT87_05330 | Not Available | Negative | 1311612 - 1312361 | 27200.4 |
| histone deacetylase | EHT87_05335 | Not Available | Positive | 1312405 - 1313307 | 34078.2 |
| hypothetical protein | EHT87_05340 | Not Available | Positive | 1313349 - 1313864 | 18775.2 |
| hypothetical protein | EHT87_05345 | Not Available | Positive | 1313828 - 1315198 | 49849.8 |
| kyphoscoliosis peptidase | EHT87_05350 | Not Available | Negative | 1315275 - 1316243 | 37209.1 |
| hypothetical protein | EHT87_05355 | Not Available | Negative | 1316325 - 1317338 | 39173.8 |
| hypothetical protein | EHT87_05360 | Not Available | Negative | 1317439 - 1317978 | 19596.5 |
| duf421 domain-containing protein | EHT87_05365 | Not Available | Positive | 1318116 - 1318610 | 18948.2 |
| rna polymerase sigma factor | EHT87_05370 | Not Available | Negative | 1318673 - 1319230 | 22280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
