Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | EHT87_05225 | Not Available | Negative | 1280536 - 1281687 | 44723.3 |
| hypothetical protein | EHT87_05230 | Not Available | Negative | 1281709 - 1283409 | 63596.8 |
| transketolase | EHT87_05235 | Not Available | Negative | 1283481 - 1284392 | 32521.8 |
| nad-dependent epimerase/dehydratase family protein | EHT87_05240 | Not Available | Negative | 1284506 - 1286503 | 75596.8 |
| transketolase | EHT87_05245 | Not Available | Negative | 1286547 - 1287362 | 29420.0 |
| hypothetical protein | EHT87_05250 | Not Available | Negative | 1287364 - 1289154 | 67888.8 |
| flagellar motor protein motb | EHT87_05255 | Not Available | Negative | 1289206 - 1291242 | 74907.8 |
| alpha-amylase | EHT87_05260 | Not Available | Negative | 1291335 - 1292750 | 54103.2 |
| ribulose-phosphate 3-epimerase | EHT87_05265 | Not Available | Negative | 1292790 - 1293482 | 24754.8 |
| nad-dependent dna ligase liga | EHT87_05270 | Not Available | Positive | 1293662 - 1295707 | 76267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
