Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | EHT87_05175 | Not Available | Positive | 1268687 - 1268980 | 9260.57 |
| thioredoxin domain-containing protein | EHT87_05180 | Not Available | Negative | 1269016 - 1271079 | 77941.1 |
| glycerophosphodiester phosphodiesterase | EHT87_05185 | Not Available | Positive | 1271223 - 1272026 | 30034.3 |
| glycoside hydrolase family 16 protein | EHT87_05190 | Not Available | Positive | 1272035 - 1272832 | 30062.6 |
| mfs transporter | EHT87_05195 | Not Available | Positive | 1272920 - 1274239 | 48974.6 |
| Trna-val | Not Available | Not Available | Positive | 1274263 - 1274337 | Not Available |
| hypothetical protein | EHT87_05205 | Not Available | Negative | 1274384 - 1275427 | 40263.4 |
| hypothetical protein | EHT87_05210 | Not Available | Negative | 1275438 - 1278164 | 101883.0 |
| glycosyltransferase family 2 protein | EHT87_05215 | Not Available | Negative | 1278306 - 1279079 | 29332.9 |
| acyltransferase | EHT87_05220 | Not Available | Negative | 1279251 - 1280369 | 43312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
