Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | EHT87_05125 | Not Available | Positive | 1261041 - 1261754 | 26641.0 |
| Trna-ser | Not Available | Not Available | Positive | 1261876 - 1261966 | Not Available |
| asparaginase | EHT87_05135 | Not Available | Negative | 1262029 - 1263096 | 39481.8 |
| tatd family deoxyribonuclease | EHT87_05140 | Not Available | Negative | 1263099 - 1263878 | 29064.8 |
| glycosyltransferase | EHT87_05145 | Not Available | Negative | 1263875 - 1264867 | 37974.5 |
| polysaccharide deacetylase family protein | EHT87_05150 | Not Available | Negative | 1264864 - 1265511 | 24854.0 |
| glycosyltransferase | EHT87_05155 | Not Available | Negative | 1265545 - 1266678 | 41873.9 |
| upf0104 family protein | EHT87_05160 | Not Available | Negative | 1266685 - 1267671 | 37109.9 |
| crossover junction endodeoxyribonuclease ruvc | EHT87_05165 | Not Available | Positive | 1267705 - 1268304 | 21838.5 |
| hypothetical protein | EHT87_05170 | Not Available | Positive | 1268479 - 1268679 | 7331.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
