Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_05075 | Not Available | Negative | 1247339 - 1248451 | 41911.0 |
| sana protein | EHT87_05080 | Not Available | Negative | 1248592 - 1249299 | 26697.2 |
| dna gyrase/topoisomerase iv subunit a | EHT87_05085 | Not Available | Negative | 1249301 - 1251961 | 100454.0 |
| coa pyrophosphatase | EHT87_05090 | Not Available | Negative | 1252304 - 1252942 | 24072.3 |
| fad-binding protein | EHT87_05095 | Not Available | Negative | 1252935 - 1254524 | 58123.0 |
| alpha-l-fucosidase | EHT87_05100 | Not Available | Positive | 1254844 - 1256922 | 76965.5 |
| acyl-coa dehydrogenase | EHT87_05105 | Not Available | Positive | 1256935 - 1258125 | 43793.6 |
| helix-turn-helix domain-containing protein | EHT87_05110 | Not Available | Negative | 1258239 - 1259720 | 56910.6 |
| hypothetical protein | EHT87_05115 | Not Available | Negative | 1259837 - 1260295 | 16765.9 |
| osmc family peroxiredoxin | EHT87_05120 | Not Available | Negative | 1260486 - 1260908 | 14589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
