Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_05025 | Not Available | Positive | 1234729 - 1236120 | 50878.2 |
| duf4249 domain-containing protein | EHT87_05030 | Not Available | Positive | 1236165 - 1237259 | 40592.4 |
| tonb-dependent receptor | EHT87_05035 | Not Available | Positive | 1237278 - 1239650 | 88385.9 |
| hypothetical protein | EHT87_05040 | Not Available | Negative | 1239714 - 1241366 | 60813.1 |
| pig-l family deacetylase | EHT87_05045 | Not Available | Negative | 1241551 - 1242441 | 33304.3 |
| exopolygalacturonase | EHT87_05050 | Not Available | Positive | 1242648 - 1243976 | 49410.3 |
| duf1080 domain-containing protein | EHT87_05055 | Not Available | Positive | 1244067 - 1244885 | 30079.6 |
| zf-cgnr multi-domain protein | EHT87_05060 | Not Available | Negative | 1244994 - 1245608 | 23131.8 |
| eama family transporter | EHT87_05065 | Not Available | Positive | 1245712 - 1246644 | 33630.8 |
| hypothetical protein | EHT87_05070 | Not Available | Negative | 1246765 - 1247265 | 18823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
