Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 2 - 113 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 15 - 126 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 236 - 3133 | Not Available |
| m1 family peptidase | EHT87_00010 | Not Available | Negative | 447 - 2093 | 63118.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3268 - 4783 | Not Available |
| s9 family peptidase | EHT87_00015 | Not Available | Negative | 2132 - 4318 | 82119.1 |
| arac family transcriptional regulator | EHT87_00020 | Not Available | Negative | 4322 - 5185 | 33536.3 |
| dihydrodipicolinate synthase family protein | EHT87_00025 | Not Available | Positive | 5426 - 6337 | 32898.1 |
| 4-hydroxyproline epimerase | EHT87_00030 | Not Available | Positive | 6341 - 7342 | 36651.8 |
| fad-dependent oxidoreductase | EHT87_00035 | Not Available | Positive | 7339 - 8586 | 45432.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
