SAR116 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Puniceispirillales

Family

Genus

Description

The SAR116 cluster bacterium is a notable group of marine bacteria characterized by their distinct ecological role in oceanic environments. This cluster is particularly important due to its contribution to biogeochemical cycles, especially in nutrient cycling within marine ecosystems. The SAR116 cluster comprises seven replicons, indicating a complex genetic organization that may contribute to its adaptability and ecological functions. The genetic information of this bacterium is accessible through several sequence accessions, including NZIY00000000.1, NZPL00000000.1, NZUZ00000000.1, QOQH00000000.1, NZIT00000000.1, PBVP00000000.1, and NZFN00000000.1. These accessions provide valuable resources for researchers studying the genetics and physiology of SAR116. Ecologically, SAR116 bacteria are recognized for their role in the marine microbial community, where they help in the degradation of organic matter and the recycling of nutrients. Their presence in various oceanic regions underscores their significance in maintaining the health and stability of marine ecosystems. The unique traits of the SAR116 cluster bacterium illustrate its importance as a keystone species in ocean biogeochemistry, highlighting the interconnectedness of microbial life and nutrient dynamics in the marine environment.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR116 cluster bacterium isolate MED595 142005, whole genome

Gene Summary

Adenine Count

556131 bp

Thymine Count

555944 bp

Guanine Count

503576 bp

Cytosine Count

506236 bp

Genome Length

2124773 bp

Protein-coding Genes

2061 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDBW67_05905Not AvailableNegative1150047 - 115056519248.2
type vi secretion system membrane subunit tssmDBW67_05910Not AvailableNegative1150547 - 1154149133754.0
dotu family type iv/vi secretion system proteinDBW67_05915Not AvailableNegative1154146 - 115503932671.6
type vi secretion system baseplate subunit tsskDBW67_05920Not AvailableNegative1155036 - 115636749818.6
type vi secretion system lipoprotein tssjDBW67_05925Not AvailableNegative1156386 - 115691919084.4
fha domain-containing proteinDBW67_05930Not AvailableNegative1156928 - 115741017291.5
hypothetical proteinDBW67_05935Not AvailableNegative1157458 - 115913160147.4
type vi secretion system protein tssaDBW67_05940Not AvailablePositive1159146 - 116096066841.9
type vi secretion system contractile sheath small subunitDBW67_05945Not AvailablePositive1161010 - 116149818053.6
type vi secretion system contractile sheath large subunitDBW67_05950Not AvailablePositive1161560 - 116303254911.7

Displaying genes 8151 – 8160 of 12573 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.